pyprobound.plotting.probe_enrichment

probe_enrichment(experiment, batch, columns=None, kernel=500, max_split=None)

Plots the enrichment of sequences, binned by predicted enrichment.

Parameters:
  • experiment (Experiment) – An experiment modeling a selection.

  • batch (CountBatch) – A batch corresponding to the provided experiment.

  • columns (Sequence[int] | None) – The column indices to keep for plotting.

  • kernel (int) – The bin for average pooling of enrichment-sorted sequences.

  • max_split (int | None) – Maximum number of sequences scored at a time.

Return type:

None