PyProBound
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User Guide
Advanced Configuration
Examples
CTCF: Single Experiment
CTCF: Multiple Experiments
UbxExdHth: Binding Cooperativity
CEBPγ: EpiSELEX-seq
Dll: Kd-seq
GR: ChIP-seq
Src: Kinase-seq
Src: Kinase-seq with Early Stopping
CEBPγ: PBM
CTCF: ChIP-seq
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API Overview
pyprobound
pyprobound.aggregate
pyprobound.alphabets
pyprobound.base
pyprobound.containers
pyprobound.cooperativity
pyprobound.experiment
pyprobound.external
pyprobound.fitting
pyprobound.layers
pyprobound.loss
pyprobound.mode
pyprobound.optimizer
pyprobound.plotting
pyprobound.rounds
pyprobound.table
pyprobound.table.collate_batch_fn
collate_batch_fn()
pyprobound.table.get_dataframe
pyprobound.table.sample_counts
pyprobound.table.sample_dataframe
pyprobound.table.score
pyprobound.table.Batch
pyprobound.table.CountBatch
pyprobound.table.CountTable
pyprobound.table.EvenSampler
pyprobound.table.MultitaskLoader
pyprobound.table.Table
pyprobound.utils
PyProBound
pyprobound
pyprobound.table
pyprobound.table.collate_batch_fn
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pyprobound.table.collate_batch_fn
collate_batch_fn
(
batch
,
*
,
collate_fn_map
=
None
)
Merges a sequence of Batches into a single Batch.
Return type
:
Batch